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NERDSS
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NERDSS simulates user-defined assembly models that were previously inaccessible to existing software tools, with broad applications to predicting self-assembly in vivo and designing high-yield assemblies in vitro.
We kindly ask that you cite: Varga, M., Fu, Y., Loggia, S., Yogurtcu, O.N., & M.E. Johnson NERDSS: a nonequilibrium simulator for multibody self-assembly at the cellular scale. Biophysical Journal 118, P3026-P3040 (2020) in all publications that make use of NERDSS.
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